EFTUD2 elongation factor Tu GTP binding domain containing 2
Information
- Symbol
- EFTUD2
- Type
- protein-coding
- Description
- elongation factor Tu GTP binding domain containing 2
- Entrez Gene ID
- 9343
- Genome
- hg19
- Position
- chr17:42,927,316-42,976,813
- Genome
- hg38
- Position
- chr17:44,849,948-44,899,445
- MIM
- 603892 OMIM
- HGNC
- HGNC:30858 HGNC
- Ensembl
- ENSG00000108883 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
MGeND | ClinVar | |
---|---|---|
Pathogenic | 8 | 152 |
Likely pathogenic | 0 | 114 |
Benign | 0 | 214 |
Likely benign | 0 | 434 |
Conflicting classifications of pathogenicity | 0 | 22 |
Uncertain significance | 0 | 370 |
Ranking
ClinVar | |
---|---|
![]() |
0 |
![]() |
0 |
![]() |
148 |
![]() |
1,058 |
![]() |
40 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Type | ID |
---|---|
SYNONYM | MFDGA |
SYNONYM | MFDM |
SYNONYM | SNRNP116 |
SYNONYM | Snrp116 |
SYNONYM | Snu114 |
SYNONYM | U5-116KD |
MIM | 603892 OMIM |
HGNC | HGNC:30858 HGNC |
Ensembl | ENSG00000108883 Ensembl |
AllianceGenome | HGNC:30858 |
Descrption | Source | Links |
---|
ID | Genome | Chromosome | Start | End | Length |
---|---|---|---|---|---|
ENST00000591382.5 | hg38 | chr17 | 44,850,916 | 44,899,368 | 48,453 |
ENST00000592576.5 | hg38 | chr17 | 44,850,866 | 44,899,431 | 48,566 |
ENST00000402521.7 | hg38 | chr17 | 44,851,120 | 44,899,445 | 48,326 |
ENST00000426333.7 | hg38 | chr17 | 44,849,948 | 44,899,445 | 49,498 |
ENST00000426333.7 | hg19 | chr17 | 42,927,316 | 42,976,813 | 49,498 |
ENST00000402521.7 | hg19 | chr17 | 42,928,488 | 42,976,813 | 48,326 |
ENST00000592576.5 | hg19 | chr17 | 42,928,234 | 42,976,799 | 48,566 |
ENST00000591382.5 | hg19 | chr17 | 42,928,284 | 42,976,736 | 48,453 |
Genome browser