ZGPAT zinc finger CCCH-type and G-patch domain containing
Information
- Symbol
- ZGPAT
- Type
- protein-coding
- Description
- zinc finger CCCH-type and G-patch domain containing
- Entrez Gene ID
- 84619
- Genome
- hg19
- Position
- chr20:62,339,442-62,367,493
- Genome
- hg38
- Position
- chr20:63,708,090-63,736,141
- MIM
- 619577 OMIM
- HGNC
- HGNC:15948 HGNC
- Ensembl
- ENSG00000197114 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely benign | 0 | 6 |
| Uncertain significance | 0 | 72 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
78 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | GPATC6 |
| SYNONYM | GPATCH6 |
| SYNONYM | KIAA1847 |
| SYNONYM | ZC3H9 |
| SYNONYM | ZC3HDC9 |
| SYNONYM | ZIP |
| MIM | 619577 OMIM |
| HGNC | HGNC:15948 HGNC |
| Ensembl | ENSG00000197114 Ensembl |
| AllianceGenome | HGNC:15948 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000328969.5 | hg38 | chr20 | 63,708,090 | 63,736,141 | 28,052 |
| ENST00000369967.7 | hg38 | chr20 | 63,708,086 | 63,736,142 | 28,057 |
| ENST00000355969.11 | hg38 | chr20 | 63,708,039 | 63,736,142 | 28,104 |
| ENST00000448100.6 | hg38 | chr20 | 63,707,465 | 63,736,141 | 28,677 |
| ENST00000357119.8 | hg38 | chr20 | 63,708,053 | 63,736,142 | 28,090 |
| ENST00000448100.6 | hg19 | chr20 | 62,338,817 | 62,367,493 | 28,677 |
| ENST00000355969.11 | hg19 | chr20 | 62,339,391 | 62,367,494 | 28,104 |
| ENST00000357119.8 | hg19 | chr20 | 62,339,405 | 62,367,494 | 28,090 |
| ENST00000369967.7 | hg19 | chr20 | 62,339,438 | 62,367,494 | 28,057 |
| ENST00000328969.5 | hg19 | chr20 | 62,339,442 | 62,367,493 | 28,052 |
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