PGAP4 post-GPI attachment to proteins GalNAc transferase 4
Information
- Symbol
- PGAP4
- Type
- protein-coding
- Description
- post-GPI attachment to proteins GalNAc transferase 4
- Entrez Gene ID
- 84302
- Genome
- hg19
- Position
- chr9:104,235,453-104,295,730
- Genome
- hg38
- Position
- chr9:101,473,171-101,533,448
- MIM
- 620264 OMIM
- HGNC
- HGNC:28180 HGNC
- Ensembl
- ENSG00000165152 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Uncertain significance | 0 | 36 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
36 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C9orf125 |
| SYNONYM | TMEM246 |
| MIM | 620264 OMIM |
| HGNC | HGNC:28180 HGNC |
| Ensembl | ENSG00000165152 Ensembl |
| AllianceGenome | HGNC:28180 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000374851.1 | hg38 | chr9 | 101,473,171 | 101,533,448 | 60,278 |
| ENST00000374847.5 | hg38 | chr9 | 101,473,171 | 101,487,117 | 13,947 |
| ENST00000374848.8 | hg38 | chr9 | 101,473,170 | 101,487,173 | 14,004 |
| ENST00000374848.8 | hg19 | chr9 | 104,235,452 | 104,249,455 | 14,004 |
| ENST00000374847.5 | hg19 | chr9 | 104,235,453 | 104,249,399 | 13,947 |
| ENST00000374851.1 | hg19 | chr9 | 104,235,453 | 104,295,730 | 60,278 |
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