CENPT centromere protein T

Go to:

Information
Clinical Significance
Ranking
Frequency
Disease area statistics
Locus Zoom
Variants
Genome browser

Information

Symbol: CENPT
Type: protein-coding
Description: centromere protein T
Entrez Gene ID: 80152
Genome: hg19
Position: chr16:67,862,060-67,881,596
Genome: hg38
Position: chr16:67,828,157-67,847,693
MIM: 611510 OMIM
HGNC: HGNC:25787 HGNC
Ensembl: ENSG00000102901 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Pathogenic	0	2
Likely pathogenic	0	2
Benign	0	44
Likely benign	0	102
Uncertain significance	0	132

Ranking

	ClinVar
	0
	0
	26
	248
	2

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

[No Data.]

Locus Zoom

Variants

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	C16orf56
SYNONYM	CENP-T
SYNONYM	SSMGA
MIM	611510 OMIM
HGNC	HGNC:25787 HGNC
Ensembl	ENSG00000102901 Ensembl
AllianceGenome	HGNC:25787

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000564817.5	hg38	chr16	67,828,209	67,833,918	5,710
ENST00000440851.6	hg38	chr16	67,828,161	67,835,338	7,178
ENST00000626059.2	hg38	chr16	67,828,165	67,833,896	5,732
ENST00000562787.6	hg38	chr16	67,828,157	67,847,693	19,537
ENST00000562787.6	hg19	chr16	67,862,060	67,881,596	19,537
ENST00000440851.6	hg19	chr16	67,862,064	67,869,241	7,178
ENST00000564817.5	hg19	chr16	67,862,112	67,867,821	5,710
ENST00000626059.2	hg19	chr16	67,862,068	67,867,799	5,732

Genome browser