LRFN4 leucine rich repeat and fibronectin type III domain containing 4
Information
- Symbol
- LRFN4
- Type
- protein-coding
- Description
- leucine rich repeat and fibronectin type III domain containing 4
- Entrez Gene ID
- 78999
- Genome
- hg19
- Position
- chr11:66,624,535-66,627,946
- Genome
- hg38
- Position
- chr11:66,857,064-66,860,475
- MIM
- 612810 OMIM
- HGNC
- HGNC:28456 HGNC
- Ensembl
- ENSG00000173621 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 2 |
| Likely benign | 0 | 2 |
| Uncertain significance | 0 | 78 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
82 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | FIGLER6 |
| SYNONYM | SALM3 |
| SYNONYM | SALM3. |
| MIM | 612810 OMIM |
| HGNC | HGNC:28456 HGNC |
| Ensembl | ENSG00000173621 Ensembl |
| AllianceGenome | HGNC:28456 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000393952.3 | hg38 | chr11 | 66,857,118 | 66,860,475 | 3,358 |
| ENST00000309602.5 | hg38 | chr11 | 66,857,064 | 66,860,475 | 3,412 |
| ENST00000309602.5 | hg19 | chr11 | 66,624,535 | 66,627,946 | 3,412 |
| ENST00000393952.3 | hg19 | chr11 | 66,624,589 | 66,627,946 | 3,358 |
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