TPR translocated promoter region, nuclear basket protein
Information
- Symbol
- TPR
- Type
- protein-coding
- Description
- translocated promoter region, nuclear basket protein
- Entrez Gene ID
- 7175
- Genome
- hg19
- Position
- chr1:186,280,784-186,344,385
- Genome
- hg38
- Position
- chr1:186,311,652-186,375,253
- MIM
- 189940 OMIM
- HGNC
- HGNC:12017 HGNC
- Ensembl
- ENSG00000047410 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 16 |
| Likely pathogenic | 0 | 4 |
| Benign | 0 | 16 |
| Likely benign | 0 | 34 |
| Uncertain significance | 0 | 164 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
6 |
 |
210 |
 |
12 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | MRT79 |
| MIM | 189940 OMIM |
| HGNC | HGNC:12017 HGNC |
| Ensembl | ENSG00000047410 Ensembl |
| AllianceGenome | HGNC:12017 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000613151.1 | hg38 | chr1 | 186,353,871 | 186,375,325 | 21,455 |
| ENST00000367478.9 | hg38 | chr1 | 186,311,652 | 186,375,253 | 63,602 |
| ENST00000367478.9 | hg19 | chr1 | 186,280,784 | 186,344,385 | 63,602 |
| ENST00000613151.1 | hg19 | chr1 | 186,323,003 | 186,344,457 | 21,455 |
| Key | Value |
|---|---|
| strand | - |
| UniProt | OG |
| start | 186,280,785 |
| Gene Symbol | TPR |
| Entrez GeneId | 7,175 |
| Chr Band | 1q25 |
| end | 186,344,456 |
| chr | chr1 |
| Name | translocated promoter region |
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