TFE3 transcription factor binding to IGHM enhancer 3
Information
- Symbol
- TFE3
- Type
- protein-coding
- Description
- transcription factor binding to IGHM enhancer 3
- Entrez Gene ID
- 7030
- Genome
- hg19
- Position
- chrX:48,886,237-48,900,883
- Genome
- hg38
- Position
- chrX:49,028,726-49,043,357
- MIM
- 314310 OMIM
- HGNC
- HGNC:11752 HGNC
- Ensembl
- ENSG00000068323 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
MGeND | ClinVar | |
---|---|---|
Pathogenic | 0 | 18 |
Likely pathogenic | 0 | 16 |
Benign | 0 | 4 |
Likely benign | 0 | 36 |
not provided | 9 | 0 |
Uncertain significance | 0 | 80 |
Ranking
ClinVar | |
---|---|
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0 |
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0 |
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4 |
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134 |
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12 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Type | ID |
---|---|
SYNONYM | MRXSPF |
SYNONYM | RCCP2 |
SYNONYM | RCCX1 |
SYNONYM | TFEA |
SYNONYM | bHLHe33 |
MIM | 314310 OMIM |
HGNC | HGNC:11752 HGNC |
Ensembl | ENSG00000068323 Ensembl |
AllianceGenome | HGNC:11752 |
Descrption | Source | Links |
---|
ID | Genome | Chromosome | Start | End | Length |
---|---|---|---|---|---|
ENST00000315869.8 | hg38 | chrX | 49,028,726 | 49,043,357 | 14,632 |
ENST00000315869.8 | hg19 | chrX | 48,886,237 | 48,900,883 | 14,647 |
Key | Value |
---|---|
strand | - |
UniProt | OG |
start | 48,886,237 |
Gene Symbol | TFE3 |
Entrez GeneId | 7,030 |
Chr Band | Xp11.22 |
end | 48,901,042 |
chr | chrX |
Name | transcription factor binding to IGHM enhancer 3 |
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