SUPT5H SPT5 homolog, DSIF elongation factor subunit
Information
- Symbol
- SUPT5H
- Type
- protein-coding
- Description
- SPT5 homolog, DSIF elongation factor subunit
- Entrez Gene ID
- 6829
- Genome
- hg19
- Position
- chr19:39,932,283-39,967,310
- Genome
- hg38
- Position
- chr19:39,441,643-39,476,670
- MIM
- 602102 OMIM
- HGNC
- HGNC:11469 HGNC
- Ensembl
- ENSG00000196235 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
MGeND | ClinVar | |
---|---|---|
Benign | 0 | 10 |
Likely benign | 0 | 8 |
Uncertain significance | 0 | 64 |
Ranking
ClinVar | |
---|---|
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0 |
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0 |
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0 |
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82 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data | : |
MGeND data only
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Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Type | ID |
---|---|
SYNONYM | SPT5 |
SYNONYM | SPT5H |
SYNONYM | Tat-CT1 |
MIM | 602102 OMIM |
HGNC | HGNC:11469 HGNC |
Ensembl | ENSG00000196235 Ensembl |
AllianceGenome | HGNC:11469 |
Descrption | Source | Links |
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ID | Genome | Chromosome | Start | End | Length |
---|---|---|---|---|---|
ENST00000598725.5 | hg38 | chr19 | 39,445,684 | 39,476,670 | 30,987 |
ENST00000402194.6 | hg38 | chr19 | 39,445,546 | 39,476,666 | 31,121 |
ENST00000599117.5 | hg38 | chr19 | 39,441,643 | 39,476,670 | 35,028 |
ENST00000359191.10 | hg38 | chr19 | 39,445,644 | 39,476,670 | 31,027 |
ENST00000432763.7 | hg38 | chr19 | 39,445,582 | 39,476,670 | 31,089 |
ENST00000402194.6 | hg19 | chr19 | 39,936,186 | 39,967,306 | 31,121 |
ENST00000432763.7 | hg19 | chr19 | 39,936,222 | 39,967,310 | 31,089 |
ENST00000359191.10 | hg19 | chr19 | 39,936,284 | 39,967,310 | 31,027 |
ENST00000598725.5 | hg19 | chr19 | 39,936,324 | 39,967,310 | 30,987 |
ENST00000599117.5 | hg19 | chr19 | 39,932,283 | 39,967,310 | 35,028 |
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