SPI1 Spi-1 proto-oncogene

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
Locus Zoom
Variants
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Information

Symbol: SPI1
Type: protein-coding
Description: Spi-1 proto-oncogene
Entrez Gene ID: 6688
Genome: hg19
Position: chr11:47,376,464-47,399,942
Genome: hg38
Position: chr11:47,354,913-47,378,391
MIM: 165170 OMIM
HGNC: HGNC:11241 HGNC
Ensembl: ENSG00000066336 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Pathogenic	0	10
Likely pathogenic	0	8
Benign	0	10
Likely benign	0	4
not provided	10	0
Uncertain significance	0	24

Ranking

	ClinVar
	0
	0
	0
	52
	4

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

Locus Zoom

Variants

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Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

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Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	AGM10
SYNONYM	OF
SYNONYM	PU.1
SYNONYM	SFPI1
SYNONYM	SPI-1
SYNONYM	SPI-A
MIM	165170 OMIM
HGNC	HGNC:11241 HGNC
Ensembl	ENSG00000066336 Ensembl
AllianceGenome	HGNC:11241

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000533030.1	hg38	chr11	47,355,101	47,378,523	23,423
ENST00000713542.1	hg38	chr11	47,354,860	47,378,547	23,688
ENST00000713543.1	hg38	chr11	47,354,860	47,409,369	54,510
ENST00000533968.1	hg38	chr11	47,358,181	47,378,487	20,307
ENST00000227163.8	hg38	chr11	47,354,913	47,378,391	23,479
ENST00000378538.8	hg38	chr11	47,354,860	47,378,547	23,688
ENST00000713542.1	hg19	chr11	47,376,411	47,400,098	23,688
ENST00000378538.8	hg19	chr11	47,376,411	47,400,098	23,688
ENST00000713543.1	hg19	chr11	47,376,411	47,430,920	54,510
ENST00000227163.8	hg19	chr11	47,376,464	47,399,942	23,479
ENST00000533030.1	hg19	chr11	47,376,652	47,400,074	23,423
ENST00000533968.1	hg19	chr11	47,379,732	47,400,038	20,307

Key	Value
strand	-
UniProt	OG
start	47,376,408
Gene Symbol	SPI1
Entrez GeneId	6,688
Chr Band	11p11.2
end	47,400,126
chr	chr11

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