TRAPPC2 trafficking protein particle complex subunit 2

Information
Symbol
TRAPPC2
Type
protein-coding
Description
trafficking protein particle complex subunit 2
Entrez Gene ID
6399
Genome
hg19
Position
chrX:13,730,364-13,752,739
Genome
hg38
Position
chrX:13,712,245-13,734,620
MIM
300202 OMIM
HGNC
HGNC:23068 HGNC
Ensembl
ENSG00000196459 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Pathogenic 40 40
Likely pathogenic 0 12
Benign 0 68
Likely benign 0 52
Conflicting classifications of pathogenicity 0 8
not provided 7 0
Uncertain significance 0 100
Ranking
ClinVar
0
0
10
236
22
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM MIP2A
SYNONYM SEDL
SYNONYM SEDT
SYNONYM TRAPPC2P1
SYNONYM TRS20
SYNONYM ZNF547L
SYNONYM hYP38334
MIM 300202 OMIM
HGNC HGNC:23068 HGNC
Ensembl ENSG00000196459 Ensembl
AllianceGenome HGNC:23068
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000519885.5 hg38 chrX 13,715,837 13,734,575 18,739
ENST00000458511.7 hg38 chrX 13,714,200 13,734,599 20,400
ENST00000518847.2 hg38 chrX 13,714,201 13,722,414 8,214
ENST00000683569.1 hg38 chrX 13,712,264 13,734,633 22,370
ENST00000359680.9 hg38 chrX 13,712,244 13,734,635 22,392
ENST00000683983.1 hg38 chrX 13,712,245 13,734,620 22,376
ENST00000380579.6 hg38 chrX 13,712,245 13,734,620 22,376
ENST00000359680.9 hg19 chrX 13,730,363 13,752,754 22,392
ENST00000380579.6 hg19 chrX 13,730,364 13,752,739 22,376
ENST00000683983.1 hg19 chrX 13,730,364 13,752,739 22,376
ENST00000683569.1 hg19 chrX 13,730,383 13,752,752 22,370
ENST00000458511.7 hg19 chrX 13,732,319 13,752,718 20,400
ENST00000518847.2 hg19 chrX 13,732,320 13,740,533 8,214
ENST00000519885.5 hg19 chrX 13,733,956 13,752,694 18,739
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