SDC1 syndecan 1

Information
Symbol
SDC1
Type
protein-coding
Description
syndecan 1
Entrez Gene ID
6382
Genome
hg19
Position
chr2:20,400,558-20,424,891
Genome
hg38
Position
chr2:20,200,797-20,225,130
MIM
186355 OMIM
HGNC
HGNC:10658 HGNC
Ensembl
ENSG00000115884 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 10
Likely benign 0 6
Uncertain significance 0 24
Ranking
ClinVar
0
0
0
38
2
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM CD138
SYNONYM SDC
SYNONYM SYND1
SYNONYM syndecan
MIM 186355 OMIM
HGNC HGNC:10658 HGNC
Ensembl ENSG00000115884 Ensembl
AllianceGenome HGNC:10658
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000254351.9 hg38 chr2 20,200,797 20,225,130 24,334
ENST00000381150.5 hg38 chr2 20,200,799 20,225,433 24,635
ENST00000403076.5 hg38 chr2 20,201,486 20,225,096 23,611
ENST00000254351.9 hg19 chr2 20,400,558 20,424,891 24,334
ENST00000381150.5 hg19 chr2 20,400,560 20,425,194 24,635
ENST00000403076.5 hg19 chr2 20,401,247 20,424,857 23,611
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