RARG retinoic acid receptor gamma
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 2 |
| Likely benign | 0 | 2 |
| not provided | 1 | 0 |
| Uncertain significance | 0 | 10 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
14 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | NR1B3 |
| SYNONYM | RARC |
| SYNONYM | RARgamma |
| MIM | 180190 OMIM |
| HGNC | HGNC:9866 HGNC |
| Ensembl | ENSG00000172819 Ensembl |
| AllianceGenome | HGNC:9866 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000394426.5 | hg38 | chr12 | 53,210,567 | 53,232,256 | 21,690 |
| ENST00000543726.1 | hg38 | chr12 | 53,211,393 | 53,220,413 | 9,021 |
| ENST00000338561.9 | hg38 | chr12 | 53,211,331 | 53,220,259 | 8,929 |
| ENST00000425354.7 | hg38 | chr12 | 53,210,569 | 53,232,209 | 21,641 |
| ENST00000394426.5 | hg19 | chr12 | 53,604,351 | 53,626,040 | 21,690 |
| ENST00000425354.7 | hg19 | chr12 | 53,604,353 | 53,625,993 | 21,641 |
| ENST00000338561.9 | hg19 | chr12 | 53,605,115 | 53,614,043 | 8,929 |
| ENST00000543726.1 | hg19 | chr12 | 53,605,177 | 53,614,197 | 9,021 |
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