PTPRCAP protein tyrosine phosphatase receptor type C associated protein
Information
- Symbol
- PTPRCAP
- Type
- protein-coding
- Description
- protein tyrosine phosphatase receptor type C associated protein
- Entrez Gene ID
- 5790
- Genome
- hg19
- Position
- chr11:67,202,981-67,205,153
- Genome
- hg38
- Position
- chr11:67,435,510-67,437,682
- MIM
- 601577 OMIM
- HGNC
- HGNC:9667 HGNC
- Ensembl
- ENSG00000213402 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely benign | 0 | 4 |
| Uncertain significance | 0 | 20 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
24 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CD45-AP |
| SYNONYM | LPAP |
| MIM | 601577 OMIM |
| HGNC | HGNC:9667 HGNC |
| Ensembl | ENSG00000213402 Ensembl |
| AllianceGenome | HGNC:9667 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000326294.4 | hg38 | chr11 | 67,435,510 | 67,437,682 | 2,173 |
| ENST00000326294.4 | hg19 | chr11 | 67,202,981 | 67,205,153 | 2,173 |
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