POGK pogo transposable element derived with KRAB domain

Information
Symbol
POGK
Type
protein-coding
Description
pogo transposable element derived with KRAB domain
Entrez Gene ID
57645
Genome
hg19
Position
chr1:166,809,326-166,823,710
Genome
hg38
Position
chr1:166,840,089-166,854,473
MIM
620039 OMIM
HGNC
HGNC:18800 HGNC
Ensembl
ENSG00000143157 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 2
Uncertain significance 0 42
Ranking
ClinVar
0
0
0
44
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency
TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence
Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM BASS2
SYNONYM KRBOX2
SYNONYM LST003
MIM 620039 OMIM
HGNC HGNC:18800 HGNC
Ensembl ENSG00000143157 Ensembl
AllianceGenome HGNC:18800
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000367875.1 hg38 chr1 166,840,089 166,854,473 14,385
ENST00000367876.9 hg38 chr1 166,839,475 166,856,359 16,885
ENST00000367876.9 hg19 chr1 166,808,712 166,825,596 16,885
ENST00000367875.1 hg19 chr1 166,809,326 166,823,710 14,385
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