VANGL2 VANGL planar cell polarity protein 2

Information
Symbol
VANGL2
Type
protein-coding
Description
VANGL planar cell polarity protein 2
Entrez Gene ID
57216
Genome
hg19
Position
chr1:160,370,354-160,398,460
Genome
hg38
Position
chr1:160,400,564-160,428,670
MIM
600533 OMIM
HGNC
HGNC:15511 HGNC
Ensembl
ENSG00000162738 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 12
Likely benign 0 12
risk factor 0 4
Uncertain significance 0 44
Ranking
ClinVar
0
0
6
58
4
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM LPP1
SYNONYM LTAP
SYNONYM STB1
SYNONYM STBM
SYNONYM STBM1
MIM 600533 OMIM
HGNC HGNC:15511 HGNC
Ensembl ENSG00000162738 Ensembl
AllianceGenome HGNC:15511
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000696602.1 hg38 chr1 160,400,564 160,428,670 28,107
ENST00000368061.3 hg38 chr1 160,400,564 160,428,670 28,107
ENST00000696602.1 hg19 chr1 160,370,354 160,398,460 28,107
ENST00000368061.3 hg19 chr1 160,370,354 160,398,460 28,107
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