GOPC golgi associated PDZ and coiled-coil motif containing
Information
- Symbol
- GOPC
- Type
- protein-coding
- Description
- golgi associated PDZ and coiled-coil motif containing
- Entrez Gene ID
- 57120
- Genome
- hg19
- Position
- chr6:117,881,432-117,923,674
- Genome
- hg38
- Position
- chr6:117,560,269-117,602,511
- MIM
- 606845 OMIM
- HGNC
- HGNC:17643 HGNC
- Ensembl
- ENSG00000047932 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely benign | 0 | 6 |
| not provided | 3 | 0 |
| Uncertain significance | 0 | 42 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
48 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CAL |
| SYNONYM | FIG |
| SYNONYM | GOPC1 |
| SYNONYM | PIST |
| SYNONYM | dJ94G16.2 |
| MIM | 606845 OMIM |
| HGNC | HGNC:17643 HGNC |
| Ensembl | ENSG00000047932 Ensembl |
| AllianceGenome | HGNC:17643 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000368498.7 | hg38 | chr6 | 117,560,269 | 117,602,511 | 42,243 |
| ENST00000535237.2 | hg38 | chr6 | 117,560,272 | 117,602,542 | 42,271 |
| ENST00000052569.10 | hg38 | chr6 | 117,560,269 | 117,602,528 | 42,260 |
| ENST00000368498.7 | hg19 | chr6 | 117,881,432 | 117,923,674 | 42,243 |
| ENST00000052569.10 | hg19 | chr6 | 117,881,432 | 117,923,691 | 42,260 |
| ENST00000535237.2 | hg19 | chr6 | 117,881,435 | 117,923,705 | 42,271 |
| Key | Value |
|---|---|
| strand | - |
| start | 117,881,432 |
| Gene Symbol | GOPC |
| Entrez GeneId | 57,120 |
| Chr Band | 6q21 |
| end | 117,923,704 |
| chr | chr6 |
| Name | golgi associated PDZ and coiled-coil motif containing |
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