PGLYRP4 peptidoglycan recognition protein 4
Information
- Symbol
- PGLYRP4
- Type
- protein-coding
- Description
- peptidoglycan recognition protein 4
- Entrez Gene ID
- 57115
- Genome
- hg19
- Position
- chr1:153,302,596-153,321,317
- Genome
- hg38
- Position
- chr1:153,330,120-153,348,841
- MIM
- 608198 OMIM
- HGNC
- HGNC:30015 HGNC
- Ensembl
- ENSG00000163218 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely benign | 0 | 4 |
| Uncertain significance | 0 | 42 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
46 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | PGLYRPIbeta |
| SYNONYM | PGRP-Ibeta |
| SYNONYM | PGRPIB |
| SYNONYM | SBBI67 |
| MIM | 608198 OMIM |
| HGNC | HGNC:30015 HGNC |
| Ensembl | ENSG00000163218 Ensembl |
| AllianceGenome | HGNC:30015 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000368739.3 | hg38 | chr1 | 153,330,120 | 153,348,840 | 18,721 |
| ENST00000359650.10 | hg38 | chr1 | 153,330,120 | 153,348,841 | 18,722 |
| ENST00000368739.3 | hg19 | chr1 | 153,302,596 | 153,321,316 | 18,721 |
| ENST00000359650.10 | hg19 | chr1 | 153,302,596 | 153,321,317 | 18,722 |
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