SMCO4 single-pass membrane protein with coiled-coil domains 4
Information
- Symbol
- SMCO4
- Type
- protein-coding
- Description
- single-pass membrane protein with coiled-coil domains 4
- Entrez Gene ID
- 56935
- Genome
- hg19
- Position
- chr11:93,211,638-93,276,557
- Genome
- hg38
- Position
- chr11:93,478,472-93,543,391
- MIM
- 609477 OMIM
- HGNC
- HGNC:24810 HGNC
- Ensembl
- ENSG00000166002 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Uncertain significance | 0 | 6 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
6 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C11orf75 |
| SYNONYM | FN5 |
| MIM | 609477 OMIM |
| HGNC | HGNC:24810 HGNC |
| Ensembl | ENSG00000166002 Ensembl |
| AllianceGenome | HGNC:24810 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000527149.5 | hg38 | chr11 | 93,478,941 | 93,537,915 | 58,975 |
| ENST00000525141.1 | hg38 | chr11 | 93,478,472 | 93,499,351 | 20,880 |
| ENST00000298966.7 | hg38 | chr11 | 93,478,472 | 93,543,391 | 64,920 |
| ENST00000596676.2 | hg38 | chr11 | 93,479,010 | 93,479,189 | 180 |
| ENST00000525141.1 | hg19 | chr11 | 93,211,638 | 93,232,517 | 20,880 |
| ENST00000298966.7 | hg19 | chr11 | 93,211,638 | 93,276,557 | 64,920 |
| ENST00000527149.5 | hg19 | chr11 | 93,212,107 | 93,271,081 | 58,975 |
| ENST00000596676.2 | hg19 | chr11 | 93,212,176 | 93,212,355 | 180 |
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