PCOTH prostate and testis expressed opposite C1QTNF9B and MIPEP
Information
- Symbol
- PCOTH
- Type
- ncRNA
- Description
- prostate and testis expressed opposite C1QTNF9B and MIPEP
- Entrez Gene ID
- 542767
- Genome
- hg19
- Position
- chr13:24,462,981-24,466,243
- Genome
- hg38
- Position
- chr13:23,888,842-23,892,104
- MIM
- 617122 OMIM
- HGNC
- HGNC:39839 HGNC
- Ensembl
- ENSG00000205861 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| not provided | 1 | 0 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
0 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C1QTNF9B-AS1 |
| MIM | 617122 OMIM |
| HGNC | HGNC:39839 HGNC |
| Ensembl | ENSG00000205861 Ensembl |
| AllianceGenome | HGNC:39839 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000663394.1 | hg38 | chr13 | 23,889,431 | 23,892,103 | 2,673 |
| ENST00000417034.1 | hg38 | chr13 | 23,891,459 | 23,897,263 | 5,805 |
| ENST00000382133.9 | hg38 | chr13 | 23,888,842 | 23,892,104 | 3,263 |
| ENST00000382133.9 | hg19 | chr13 | 24,462,981 | 24,466,243 | 3,263 |
| ENST00000663394.1 | hg19 | chr13 | 24,463,570 | 24,466,242 | 2,673 |
| ENST00000417034.1 | hg19 | chr13 | 24,465,598 | 24,471,402 | 5,805 |
Genome browser