DELEC1 deleted in esophageal cancer 1
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely pathogenic | 1 | 0 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CTS9 |
| SYNONYM | DEC1 |
| MIM | 604767 OMIM |
| HGNC | HGNC:23658 HGNC |
| Ensembl | ENSG00000173077 Ensembl |
| AllianceGenome | HGNC:23658 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000647970.1 | hg38 | chr9 | 115,209,938 | 115,314,415 | 104,478 |
| ENST00000648852.1 | hg38 | chr9 | 114,850,968 | 115,121,030 | 270,063 |
| ENST00000649121.1 | hg38 | chr9 | 114,969,584 | 115,240,989 | 271,406 |
| ENST00000374016.5 | hg38 | chr9 | 115,141,818 | 115,402,644 | 260,827 |
| ENST00000648852.1 | hg19 | chr9 | 117,613,248 | 117,883,309 | 270,062 |
| ENST00000649121.1 | hg19 | chr9 | 117,731,864 | 118,003,268 | 271,405 |
| ENST00000374016.5 | hg19 | chr9 | 117,904,097 | 118,164,923 | 260,827 |
| ENST00000647970.1 | hg19 | chr9 | 117,972,217 | 118,076,694 | 104,478 |
| Key | Value |
|---|---|
| strand | + |
| UniProt | TSG |
| start | 117,904,096 |
| Gene Symbol | DEC1 |
| Entrez GeneId | 50,514 |
| Chr Band | 9q32 |
| end | 118,164,922 |
| chr | chr9 |
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