OPCML opioid binding protein/cell adhesion molecule like
Information
- Symbol
- OPCML
- Type
- protein-coding
- Description
- opioid binding protein/cell adhesion molecule like
- Entrez Gene ID
- 4978
- Genome
- hg19
- Position
- chr11:132,284,871-132,813,566
- Genome
- hg38
- Position
- chr11:132,414,977-132,943,671
- MIM
- 600632 OMIM
- HGNC
- HGNC:8143 HGNC
- Ensembl
- ENSG00000183715 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 2 |
| Benign | 0 | 2 |
| Likely benign | 0 | 6 |
| not provided | 67 | 0 |
| Uncertain significance | 0 | 24 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
30 |
 |
4 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | IGLON1 |
| SYNONYM | OBCAM |
| SYNONYM | OPCM |
| MIM | 600632 OMIM |
| HGNC | HGNC:8143 HGNC |
| Ensembl | ENSG00000183715 Ensembl |
| AllianceGenome | HGNC:8143 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000374778.4 | hg38 | chr11 | 132,420,020 | 132,943,768 | 523,749 |
| ENST00000331898.11 | hg38 | chr11 | 132,414,977 | 132,943,671 | 528,695 |
| ENST00000524381.6 | hg38 | chr11 | 132,414,981 | 133,532,501 | 1,117,521 |
| ENST00000541867.6 | hg38 | chr11 | 132,414,981 | 132,943,836 | 528,856 |
| ENST00000331898.11 | hg19 | chr11 | 132,284,871 | 132,813,566 | 528,696 |
| ENST00000541867.6 | hg19 | chr11 | 132,284,875 | 132,813,731 | 528,857 |
| ENST00000524381.6 | hg19 | chr11 | 132,284,875 | 133,402,396 | 1,117,522 |
| ENST00000374778.4 | hg19 | chr11 | 132,289,914 | 132,813,663 | 523,750 |
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