ATP2A3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3
Information
- Symbol
- ATP2A3
- Type
- protein-coding
- Description
- ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3
- Entrez Gene ID
- 489
- Genome
- hg19
- Position
- chr17:3,828,585-3,867,585
- Genome
- hg38
- Position
- chr17:3,925,291-3,964,291
- MIM
- 601929 OMIM
- HGNC
- HGNC:813 HGNC
- Ensembl
- ENSG00000074370 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 58 |
| Likely benign | 0 | 64 |
| Uncertain significance | 0 | 104 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
18 |
 |
200 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | SERCA3 |
| MIM | 601929 OMIM |
| HGNC | HGNC:813 HGNC |
| Ensembl | ENSG00000074370 Ensembl |
| AllianceGenome | HGNC:813 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000352011.7 | hg38 | chr17 | 3,925,291 | 3,964,346 | 39,056 |
| ENST00000359983.7 | hg38 | chr17 | 3,925,291 | 3,964,291 | 39,001 |
| ENST00000309890.11 | hg38 | chr17 | 3,923,870 | 3,964,464 | 40,595 |
| ENST00000397043.7 | hg38 | chr17 | 3,925,346 | 3,964,415 | 39,070 |
| ENST00000397041.8 | hg38 | chr17 | 3,923,873 | 3,964,437 | 40,565 |
| ENST00000397035.7 | hg38 | chr17 | 3,923,875 | 3,964,419 | 40,545 |
| ENST00000309890.11 | hg19 | chr17 | 3,827,164 | 3,867,758 | 40,595 |
| ENST00000397041.8 | hg19 | chr17 | 3,827,167 | 3,867,731 | 40,565 |
| ENST00000397035.7 | hg19 | chr17 | 3,827,169 | 3,867,713 | 40,545 |
| ENST00000359983.7 | hg19 | chr17 | 3,828,585 | 3,867,585 | 39,001 |
| ENST00000352011.7 | hg19 | chr17 | 3,828,585 | 3,867,640 | 39,056 |
| ENST00000397043.7 | hg19 | chr17 | 3,828,640 | 3,867,709 | 39,070 |
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