CNOT3 CCR4-NOT transcription complex subunit 3
Information
- Symbol
- CNOT3
- Type
- protein-coding
- Description
- CCR4-NOT transcription complex subunit 3
- Entrez Gene ID
- 4849
- Genome
- hg19
- Position
- chr19:54,645,112-54,659,418
- Genome
- hg38
- Position
- chr19:54,141,396-54,155,680
- MIM
- 604910 OMIM
- HGNC
- HGNC:7879 HGNC
- Ensembl
- ENSG00000088038 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 40 |
| Likely pathogenic | 0 | 26 |
| Benign | 0 | 65 |
| Likely benign | 0 | 164 |
| Conflicting classifications of pathogenicity | 0 | 16 |
| Uncertain significance | 0 | 195 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
59 |
 |
393 |
 |
14 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | IDDSADF |
| SYNONYM | LENG2 |
| SYNONYM | NOT3 |
| SYNONYM | NOT3H |
| MIM | 604910 OMIM |
| HGNC | HGNC:7879 HGNC |
| Ensembl | ENSG00000088038 Ensembl |
| AllianceGenome | HGNC:7879 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000221232.11 | hg38 | chr19 | 54,137,762 | 54,155,681 | 17,920 |
| ENST00000617930.2 | hg38 | chr19 | 54,137,782 | 54,155,681 | 17,900 |
| ENST00000358389.7 | hg38 | chr19 | 54,141,396 | 54,155,680 | 14,285 |
| ENST00000221232.11 | hg19 | chr19 | 54,641,478 | 54,659,419 | 17,942 |
| ENST00000617930.2 | hg19 | chr19 | 54,641,498 | 54,659,419 | 17,922 |
| ENST00000358389.7 | hg19 | chr19 | 54,645,112 | 54,659,418 | 14,307 |
| Key | Value |
|---|---|
| strand | + |
| start | 54,641,435 |
| Gene Symbol | CNOT3 |
| Entrez GeneId | 4,849 |
| Chr Band | 19q13.4 |
| end | 54,659,445 |
| chr | chr19 |
| Name | CCR4-NOT transcription complex subunit 3 |
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