SMCP sperm mitochondria associated cysteine rich protein
Information
- Symbol
- SMCP
- Type
- protein-coding
- Description
- sperm mitochondria associated cysteine rich protein
- Entrez Gene ID
- 4184
- Genome
- hg19
- Position
- chr1:152,850,798-152,857,523
- Genome
- hg38
- Position
- chr1:152,878,322-152,885,047
- MIM
- 601148 OMIM
- HGNC
- HGNC:6962 HGNC
- Ensembl
- ENSG00000163206 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Uncertain significance | 0 | 6 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
6 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | HSMCSGEN1 |
| SYNONYM | MCS |
| SYNONYM | MCSP |
| MIM | 601148 OMIM |
| HGNC | HGNC:6962 HGNC |
| Ensembl | ENSG00000163206 Ensembl |
| AllianceGenome | HGNC:6962 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000368765.4 | hg38 | chr1 | 152,878,322 | 152,885,047 | 6,726 |
| ENST00000368765.4 | hg19 | chr1 | 152,850,798 | 152,857,523 | 6,726 |
| Key | Value |
|---|---|
| strand | + |
| start | 152,850,797 |
| Gene Symbol | SMCP |
| Entrez GeneId | 4,184 |
| Chr Band | 1q21.3 |
| end | 152,857,522 |
| chr | chr1 |
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