LCN10 lipocalin 10

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
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Information

Symbol: LCN10
Type: protein-coding
Description: lipocalin 10
Entrez Gene ID: 414332
Genome: hg19
Position: chr9:139,632,622-139,637,392
Genome: hg38
Position: chr9:136,738,170-136,742,940
MIM: 612904 OMIM
HGNC: HGNC:20892 HGNC
Ensembl: ENSG00000187922 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Benign	0	2
Likely benign	0	2
Uncertain significance	0	32

Ranking

	ClinVar
	0
	0
	0
	36
	0

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

[No Data.]

Locus Zoom

Variants

Search Word

Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
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Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
MIM	612904 OMIM
HGNC	HGNC:20892 HGNC
Ensembl	ENSG00000187922 Ensembl
AllianceGenome	HGNC:20892

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000497771.6	hg38	chr9	136,738,170	136,742,940	4,771
ENST00000527229.5	hg38	chr9	136,739,461	136,742,959	3,499
ENST00000474369.1	hg38	chr9	136,739,525	136,742,903	3,379
ENST00000497771.6	hg19	chr9	139,632,622	139,637,392	4,771
ENST00000527229.5	hg19	chr9	139,633,913	139,637,411	3,499
ENST00000474369.1	hg19	chr9	139,633,977	139,637,355	3,379

Key	Value
strand	-
start	139,632,618
Gene Symbol	LCN10
Entrez GeneId	414,332
Chr Band	9q34.3
end	139,637,410
chr	chr9

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