PICSAR P38 inhibited cutaneous squamous cell carcinoma associated lincRNA
Information
- Symbol
- PICSAR
- Type
- ncRNA
- Description
- P38 inhibited cutaneous squamous cell carcinoma associated lincRNA
- Entrez Gene ID
- 378825
- Genome
- hg19
- Position
- chr21:46,419,122-46,424,642
- Genome
- hg38
- Position
- chr21:44,999,208-45,004,727
- MIM
- 617191 OMIM
- HGNC
- HGNC:19725 HGNC
- Ensembl
- ENSG00000275874 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| not provided | 1 | 0 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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0 |
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0 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C21orf113 |
| SYNONYM | LINC00162 |
| SYNONYM | NCRNA00162 |
| SYNONYM | NLC1-C |
| SYNONYM | NLC1C |
| SYNONYM | PRED74 |
| MIM | 617191 OMIM |
| HGNC | HGNC:19725 HGNC |
| Ensembl | ENSG00000275874 Ensembl |
| AllianceGenome | HGNC:19725 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000615826.1 | hg38 | chr21 | 44,999,208 | 45,004,727 | 5,520 |
| ENST00000615826.1 | hg19 | chr21 | 46,419,122 | 46,424,642 | 5,521 |
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