IRF1 interferon regulatory factor 1

Go to:

Information
Clinical Significance
Ranking
Frequency
Disease area statistics
Locus Zoom
Variants
Genome browser

Information

Symbol: IRF1
Type: protein-coding
Description: interferon regulatory factor 1
Entrez Gene ID: 3659
Genome: hg19
Position: chr5:131,817,301-131,826,465
Genome: hg38
Position: chr5:132,481,609-132,490,773
MIM: 147575 OMIM
HGNC: HGNC:6116 HGNC
Ensembl: ENSG00000125347 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Pathogenic	0	8
Benign	0	28
Likely benign	0	2
not provided	6	0
Uncertain significance	0	10

Ranking

	ClinVar
	0
	0
	0
	40
	8

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

Locus Zoom

Variants

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	IMD117
SYNONYM	IRF-1
SYNONYM	MAR
MIM	147575 OMIM
HGNC	HGNC:6116 HGNC
Ensembl	ENSG00000125347 Ensembl
AllianceGenome	HGNC:6116

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000245414.9	hg38	chr5	132,481,609	132,490,773	9,165
ENST00000680139.1	hg38	chr5	132,483,762	132,490,773	7,012
ENST00000680903.1	hg38	chr5	132,483,828	132,490,777	6,950
ENST00000405885.6	hg38	chr5	132,483,086	132,490,262	7,177
ENST00000245414.9	hg19	chr5	131,817,301	131,826,465	9,165
ENST00000405885.6	hg19	chr5	131,818,778	131,825,954	7,177
ENST00000680139.1	hg19	chr5	131,819,454	131,826,465	7,012
ENST00000680903.1	hg19	chr5	131,819,520	131,826,469	6,950

Key	Value
strand	-
UniProt	TSG
start	131,817,300
Gene Symbol	IRF1
Entrez GeneId	3,659
Chr Band	5q31.1
end	131,826,464
chr	chr5

Genome browser