LINC01139 long intergenic non-protein coding RNA 1139
Information
- Symbol
- LINC01139
- Type
- ncRNA
- Description
- long intergenic non-protein coding RNA 1139
- Entrez Gene ID
- 339535
- Genome
- hg19
- Position
- chr1:238,643,741-238,649,323
- Genome
- hg38
- Position
- chr1:238,480,441-238,486,023
- HGNC
- HGNC:27924 HGNC
- Ensembl
- ENSG00000215808 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar |
|---|
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
0 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | LINK-A |
| SYNONYM | LINKA |
| HGNC | HGNC:27924 HGNC |
| Ensembl | ENSG00000215808 Ensembl |
| AllianceGenome | HGNC:27924 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000649681.1 | hg38 | chr1 | 238,480,441 | 238,486,023 | 5,583 |
| ENST00000648188.1 | hg38 | chr1 | 238,480,398 | 238,486,054 | 5,657 |
| ENST00000400946.3 | hg38 | chr1 | 238,480,372 | 238,486,053 | 5,682 |
| ENST00000649385.1 | hg38 | chr1 | 238,480,404 | 238,486,044 | 5,641 |
| ENST00000649127.1 | hg38 | chr1 | 238,476,542 | 238,486,044 | 9,503 |
| ENST00000657655.1 | hg38 | chr1 | 238,480,373 | 238,486,060 | 5,688 |
| ENST00000649127.1 | hg19 | chr1 | 238,639,842 | 238,649,344 | 9,503 |
| ENST00000400946.3 | hg19 | chr1 | 238,643,672 | 238,649,353 | 5,682 |
| ENST00000657655.1 | hg19 | chr1 | 238,643,673 | 238,649,360 | 5,688 |
| ENST00000648188.1 | hg19 | chr1 | 238,643,698 | 238,649,354 | 5,657 |
| ENST00000649385.1 | hg19 | chr1 | 238,643,704 | 238,649,344 | 5,641 |
| ENST00000649681.1 | hg19 | chr1 | 238,643,741 | 238,649,323 | 5,583 |
Genome browser