TFPT TCF3 fusion partner
Clinical Significance
MGeND | ClinVar | |
---|---|---|
Likely benign | 0 | 4 |
Conflicting classifications of pathogenicity | 0 | 2 |
Uncertain significance | 0 | 38 |
Ranking
ClinVar | |
---|---|
![]() |
0 |
![]() |
0 |
![]() |
0 |
![]() |
42 |
![]() |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Type | ID |
---|---|
SYNONYM | FB1 |
SYNONYM | INO80F |
SYNONYM | amida |
MIM | 609519 OMIM |
HGNC | HGNC:13630 HGNC |
Ensembl | ENSG00000105619 Ensembl |
AllianceGenome | HGNC:13630 |
Descrption | Source | Links |
---|
ID | Genome | Chromosome | Start | End | Length |
---|---|---|---|---|---|
ENST00000391759.6 | hg38 | chr19 | 54,107,020 | 54,115,657 | 8,638 |
ENST00000391758.5 | hg38 | chr19 | 54,107,020 | 54,115,074 | 8,055 |
ENST00000391757.1 | hg38 | chr19 | 54,107,020 | 54,115,288 | 8,269 |
ENST00000391758.5 | hg19 | chr19 | 54,610,327 | 54,618,454 | 8,128 |
ENST00000391757.1 | hg19 | chr19 | 54,610,327 | 54,618,668 | 8,342 |
ENST00000391759.6 | hg19 | chr19 | 54,610,327 | 54,619,037 | 8,711 |
Key | Value |
---|---|
strand | - |
UniProt | OG |
start | 54,610,319 |
Gene Symbol | TFPT |
Entrez GeneId | 29,844 |
Chr Band | 19q13 |
end | 54,619,054 |
chr | chr19 |
Name | TCF3 (E2A) fusion partner (in childhood leukaemia) |
Genome browser