GPX4 glutathione peroxidase 4
Clinical Significance
MGeND | ClinVar | |
---|---|---|
Pathogenic | 0 | 12 |
Likely pathogenic | 0 | 10 |
Benign | 0 | 38 |
Likely benign | 0 | 114 |
Conflicting classifications of pathogenicity | 0 | 6 |
Uncertain significance | 0 | 124 |
Ranking
ClinVar | |
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0 |
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0 |
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30 |
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258 |
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4 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
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Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
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MGeND data only
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Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
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Target data | : |
MGeND data only
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Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Type | ID |
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SYNONYM | GPx-4 |
SYNONYM | GSHPx-4 |
SYNONYM | MCSP |
SYNONYM | PHGPx |
SYNONYM | SMDS |
SYNONYM | snGPx |
SYNONYM | snPHGPx |
MIM | 138322 OMIM |
HGNC | HGNC:4556 HGNC |
Ensembl | ENSG00000167468 Ensembl |
AllianceGenome | HGNC:4556 |
Descrption | Source | Links |
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ID | Genome | Chromosome | Start | End | Length |
---|---|---|---|---|---|
ENST00000706714.1 | hg38 | chr19 | 1,104,067 | 1,106,766 | 2,700 |
ENST00000706715.1 | hg38 | chr19 | 1,104,217 | 1,106,774 | 2,558 |
ENST00000706713.1 | hg38 | chr19 | 1,103,982 | 1,106,780 | 2,799 |
ENST00000611653.4 | hg38 | chr19 | 1,104,052 | 1,106,779 | 2,728 |
ENST00000585362.7 | hg38 | chr19 | 1,104,650 | 1,106,779 | 2,130 |
ENST00000593032.6 | hg38 | chr19 | 1,104,067 | 1,106,766 | 2,700 |
ENST00000589115.6 | hg38 | chr19 | 1,104,008 | 1,106,779 | 2,772 |
ENST00000588919.5 | hg38 | chr19 | 1,104,073 | 1,106,788 | 2,716 |
ENST00000354171.13 | hg38 | chr19 | 1,103,994 | 1,106,779 | 2,786 |
ENST00000706713.1 | hg19 | chr19 | 1,103,981 | 1,106,779 | 2,799 |
ENST00000354171.13 | hg19 | chr19 | 1,103,993 | 1,106,778 | 2,786 |
ENST00000589115.6 | hg19 | chr19 | 1,104,007 | 1,106,778 | 2,772 |
ENST00000611653.4 | hg19 | chr19 | 1,104,051 | 1,106,778 | 2,728 |
ENST00000706714.1 | hg19 | chr19 | 1,104,066 | 1,106,765 | 2,700 |
ENST00000593032.6 | hg19 | chr19 | 1,104,066 | 1,106,765 | 2,700 |
ENST00000588919.5 | hg19 | chr19 | 1,104,072 | 1,106,787 | 2,716 |
ENST00000706715.1 | hg19 | chr19 | 1,104,216 | 1,106,773 | 2,558 |
ENST00000585362.7 | hg19 | chr19 | 1,104,649 | 1,106,778 | 2,130 |
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