HCCAT5 hepatocellular carcinoma associated transcript 5

Information
Symbol
HCCAT5
Type
ncRNA
Description
hepatocellular carcinoma associated transcript 5
Entrez Gene ID
283902
Genome
hg19
Position
chr16:73,126,248-73,127,673
Genome
hg38
Position
chr16:73,092,349-73,093,774
MIM
615613 OMIM
HGNC
HGNC:48612 HGNC
Ensembl
ENSG00000260880 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Ranking
ClinVar
0
0
0
0
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
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Variant name Gene AA change CDS Japanese
frequency
TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence
Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM FJ222407
SYNONYM HTA
MIM 615613 OMIM
HGNC HGNC:48612 HGNC
Ensembl ENSG00000260880 Ensembl
AllianceGenome HGNC:48612
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000642127.1 hg38 chr16 73,092,690 73,099,337 6,648
ENST00000569990.2 hg38 chr16 73,092,349 73,093,774 1,426
ENST00000659438.1 hg38 chr16 73,092,508 73,093,772 1,265
ENST00000569990.2 hg19 chr16 73,126,248 73,127,673 1,426
ENST00000659438.1 hg19 chr16 73,126,407 73,127,671 1,265
ENST00000642127.1 hg19 chr16 73,126,589 73,133,236 6,648
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