GATA4 GATA binding protein 4
Clinical Significance
MGeND | ClinVar | |
---|---|---|
Pathogenic | 8 | 54 |
Likely pathogenic | 2 | 12 |
Benign | 0 | 150 |
Likely benign | 0 | 590 |
Conflicting classifications of pathogenicity | 0 | 30 |
not provided | 2 | 0 |
Uncertain significance | 0 | 748 |
Ranking
ClinVar | |
---|---|
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0 |
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0 |
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352 |
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1,120 |
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36 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data | : |
MGeND data only
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Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Type | ID |
---|---|
SYNONYM | ASD2 |
SYNONYM | TACHD |
SYNONYM | TOF |
SYNONYM | VSD1 |
MIM | 600576 OMIM |
HGNC | HGNC:4173 HGNC |
Ensembl | ENSG00000136574 Ensembl |
AllianceGenome | HGNC:4173 |
Descrption | Source | Links |
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ID | Genome | Chromosome | Start | End | Length |
---|---|---|---|---|---|
ENST00000528712.5 | hg38 | chr8 | 11,676,959 | 11,760,000 | 83,042 |
ENST00000532059.6 | hg38 | chr8 | 11,704,202 | 11,760,002 | 55,801 |
ENST00000335135.8 | hg38 | chr8 | 11,704,204 | 11,760,002 | 55,799 |
ENST00000622443.3 | hg38 | chr8 | 11,704,222 | 11,759,994 | 55,773 |
ENST00000528712.5 | hg19 | chr8 | 11,534,468 | 11,617,509 | 83,042 |
ENST00000532059.6 | hg19 | chr8 | 11,561,711 | 11,617,511 | 55,801 |
ENST00000335135.8 | hg19 | chr8 | 11,561,713 | 11,617,511 | 55,799 |
ENST00000622443.3 | hg19 | chr8 | 11,561,731 | 11,617,503 | 55,773 |
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