TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
Information
- Symbol
- TANC2
- Type
- protein-coding
- Description
- tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
- Entrez Gene ID
- 26115
- Genome
- hg19
- Position
- chr17:61,043,596-61,505,064
- Genome
- hg38
- Position
- chr17:62,966,235-63,427,703
- MIM
- 615047 OMIM
- HGNC
- HGNC:30212 HGNC
- Ensembl
- ENSG00000170921 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 28 |
| Likely pathogenic | 0 | 40 |
| Benign | 0 | 30 |
| Likely benign | 0 | 188 |
| Conflicting classifications of pathogenicity | 0 | 6 |
| not provided | 0 | 2 |
| Uncertain significance | 0 | 482 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
82 |
 |
634 |
 |
30 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | IDDALDS |
| SYNONYM | ROLSA |
| SYNONYM | rols |
| MIM | 615047 OMIM |
| HGNC | HGNC:30212 HGNC |
| Ensembl | ENSG00000170921 Ensembl |
| AllianceGenome | HGNC:30212 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000389520.8 | hg38 | chr17 | 63,009,560 | 63,422,356 | 412,797 |
| ENST00000689528.1 | hg38 | chr17 | 62,966,235 | 63,427,703 | 461,469 |
| ENST00000424789.6 | hg38 | chr17 | 63,009,556 | 63,427,699 | 418,144 |
| ENST00000689528.1 | hg19 | chr17 | 61,043,596 | 61,505,064 | 461,469 |
| ENST00000424789.6 | hg19 | chr17 | 61,086,917 | 61,505,060 | 418,144 |
| ENST00000389520.8 | hg19 | chr17 | 61,086,921 | 61,499,717 | 412,797 |
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