CADM1 cell adhesion molecule 1
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 14 |
| Likely benign | 0 | 14 |
| Uncertain significance | 0 | 30 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
2 |
 |
56 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | BL2 |
| SYNONYM | IGSF4 |
| SYNONYM | IGSF4A |
| SYNONYM | NECL2 |
| SYNONYM | Necl-2 |
| SYNONYM | RA175 |
| SYNONYM | ST17 |
| SYNONYM | SYNCAM |
| SYNONYM | TSLC1 |
| SYNONYM | sTSLC-1 |
| SYNONYM | sgIGSF |
| SYNONYM | synCAM1 |
| MIM | 605686 OMIM |
| HGNC | HGNC:5951 HGNC |
| Ensembl | ENSG00000182985 Ensembl |
| AllianceGenome | HGNC:5951 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000612235.4 | hg38 | chr11 | 115,169,589 | 115,240,422 | 70,834 |
| ENST00000536727.5 | hg38 | chr11 | 115,174,307 | 115,504,415 | 330,109 |
| ENST00000537058.5 | hg38 | chr11 | 115,174,307 | 115,504,415 | 330,109 |
| ENST00000452722.7 | hg38 | chr11 | 115,169,236 | 115,504,415 | 335,180 |
| ENST00000542447.6 | hg38 | chr11 | 115,173,625 | 115,504,523 | 330,899 |
| ENST00000331581.11 | hg38 | chr11 | 115,169,236 | 115,504,415 | 335,180 |
| ENST00000331581.11 | hg19 | chr11 | 115,039,956 | 115,375,133 | 335,178 |
| ENST00000452722.7 | hg19 | chr11 | 115,039,956 | 115,375,133 | 335,178 |
| ENST00000536727.5 | hg19 | chr11 | 115,045,027 | 115,375,133 | 330,107 |
| ENST00000537058.5 | hg19 | chr11 | 115,045,027 | 115,375,133 | 330,107 |
| ENST00000542447.6 | hg19 | chr11 | 115,044,345 | 115,375,241 | 330,897 |
| ENST00000612235.4 | hg19 | chr11 | 115,040,309 | 115,111,142 | 70,834 |
| Key | Value |
|---|---|
| strand | - |
| UniProt | TSG |
| start | 115,044,344 |
| Gene Symbol | CADM1 |
| Entrez GeneId | 23,705 |
| Chr Band | 11q23.2 |
| end | 115,375,240 |
| chr | chr11 |
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