RTL3 retrotransposon Gag like 3
Information
- Symbol
- RTL3
- Type
- protein-coding
- Description
- retrotransposon Gag like 3
- Entrez Gene ID
- 203430
- Genome
- hg19
- Position
- chrX:77,911,565-77,914,825
- Genome
- hg38
- Position
- chrX:78,656,068-78,659,328
- HGNC
- HGNC:22997 HGNC
- Ensembl
- ENSG00000179300 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
MGeND | ClinVar | |
---|---|---|
Likely benign | 0 | 6 |
not provided | 6 | 0 |
Uncertain significance | 0 | 50 |
Ranking
ClinVar | |
---|---|
![]() |
0 |
![]() |
0 |
![]() |
0 |
![]() |
56 |
![]() |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Type | ID |
---|---|
SYNONYM | Mar3 |
SYNONYM | Mart3 |
SYNONYM | SIRH9 |
SYNONYM | ZCCHC5 |
SYNONYM | ZHC5 |
HGNC | HGNC:22997 HGNC |
Ensembl | ENSG00000179300 Ensembl |
AllianceGenome | HGNC:22997 |
Descrption | Source | Links |
---|
ID | Genome | Chromosome | Start | End | Length |
---|---|---|---|---|---|
ENST00000321110.2 | hg38 | chrX | 78,656,068 | 78,659,328 | 3,261 |
ENST00000321110.2 | hg19 | chrX | 77,911,565 | 77,914,825 | 3,261 |
Genome browser