LINC00189 long intergenic non-protein coding RNA 189
Information
- Symbol
- LINC00189
- Type
- ncRNA
- Description
- long intergenic non-protein coding RNA 189
- Entrez Gene ID
- 193629
- Genome
- hg19
- Position
- chr21:30,565,815-30,660,526
- Genome
- hg38
- Position
- chr21:29,193,494-29,288,205
- HGNC
- HGNC:18461 HGNC
- Ensembl
- ENSG00000215533 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar |
|---|
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
0 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C21orf109 |
| SYNONYM | NCRNA00189 |
| HGNC | HGNC:18461 HGNC |
| Ensembl | ENSG00000215533 Ensembl |
| AllianceGenome | HGNC:18461 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000447125.5 | hg38 | chr21 | 29,193,480 | 29,288,205 | 94,726 |
| ENST00000420364.1 | hg38 | chr21 | 29,193,494 | 29,288,205 | 94,712 |
| ENST00000431661.1 | hg38 | chr21 | 29,194,037 | 29,284,207 | 90,171 |
| ENST00000447125.5 | hg19 | chr21 | 30,565,801 | 30,660,526 | 94,726 |
| ENST00000420364.1 | hg19 | chr21 | 30,565,815 | 30,660,526 | 94,712 |
| ENST00000431661.1 | hg19 | chr21 | 30,566,358 | 30,656,528 | 90,171 |
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