LGI4 leucine rich repeat LGI family member 4

Information
Symbol
LGI4
Type
protein-coding
Description
leucine rich repeat LGI family member 4
Entrez Gene ID
163175
Genome
hg19
Position
chr19:35,615,417-35,625,963
Genome
hg38
Position
chr19:35,124,513-35,135,059
MIM
608303 OMIM
HGNC
HGNC:18712 HGNC
Ensembl
ENSG00000153902 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Pathogenic 0 16
Likely pathogenic 0 20
Benign 0 48
Likely benign 0 38
Conflicting classifications of pathogenicity 0 2
Uncertain significance 0 60
Ranking
ClinVar
0
0
26
134
20
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM AMC1
SYNONYM AMCNMY
SYNONYM LGIL3
MIM 608303 OMIM
HGNC HGNC:18712 HGNC
Ensembl ENSG00000153902 Ensembl
AllianceGenome HGNC:18712
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000310123.8 hg38 chr19 35,124,513 35,135,059 10,547
ENST00000591633.2 hg38 chr19 35,131,084 35,134,863 3,780
ENST00000392225.7 hg38 chr19 35,124,513 35,135,200 10,688
ENST00000310123.8 hg19 chr19 35,615,417 35,625,963 10,547
ENST00000392225.7 hg19 chr19 35,615,417 35,626,104 10,688
ENST00000591633.2 hg19 chr19 35,621,988 35,625,767 3,780
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