LINC00261 long intergenic non-protein coding RNA 261
Information
- Symbol
- LINC00261
- Type
- ncRNA
- Description
- long intergenic non-protein coding RNA 261
- Entrez Gene ID
- 140828
- Genome
- hg19
- Position
- chr20:22,541,191-22,559,280
- Genome
- hg38
- Position
- chr20:22,560,553-22,578,642
- MIM
- 618518 OMIM
- HGNC
- HGNC:16189 HGNC
- Ensembl
- ENSG00000259974 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar |
|---|
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
0 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | ALIEN |
| SYNONYM | C20orf56 |
| SYNONYM | DEANR1 |
| SYNONYM | FALCOR |
| SYNONYM | HCCDR1 |
| SYNONYM | LCAL62 |
| SYNONYM | NCRNA00261 |
| SYNONYM | TCONS_00027846 |
| SYNONYM | onco-lncRNA-17 |
| MIM | 618518 OMIM |
| HGNC | HGNC:16189 HGNC |
| Ensembl | ENSG00000259974 Ensembl |
| AllianceGenome | HGNC:16189 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000609300.2 | hg38 | chr20 | 22,560,553 | 22,578,586 | 18,034 |
| ENST00000697618.1 | hg38 | chr20 | 22,547,663 | 22,550,579 | 2,917 |
| ENST00000564492.1 | hg38 | chr20 | 22,560,553 | 22,578,642 | 18,090 |
| ENST00000697618.1 | hg19 | chr20 | 22,528,301 | 22,531,217 | 2,917 |
| ENST00000609300.2 | hg19 | chr20 | 22,541,191 | 22,559,224 | 18,034 |
| ENST00000564492.1 | hg19 | chr20 | 22,541,191 | 22,559,280 | 18,090 |
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