PGLYRP3 peptidoglycan recognition protein 3
Information
- Symbol
- PGLYRP3
- Type
- protein-coding
- Description
- peptidoglycan recognition protein 3
- Entrez Gene ID
- 114771
- Genome
- hg19
- Position
- chr1:153,269,592-153,285,428
- Genome
- hg38
- Position
- chr1:153,297,116-153,312,952
- MIM
- 608197 OMIM
- HGNC
- HGNC:30014 HGNC
- Ensembl
- ENSG00000159527 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 12 |
| Likely benign | 0 | 2 |
| Uncertain significance | 0 | 52 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
66 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | PGLYRPIalpha |
| SYNONYM | PGRP-Ialpha |
| SYNONYM | PGRPIA |
| MIM | 608197 OMIM |
| HGNC | HGNC:30014 HGNC |
| Ensembl | ENSG00000159527 Ensembl |
| AllianceGenome | HGNC:30014 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000290722.1 | hg38 | chr1 | 153,297,862 | 153,310,718 | 12,857 |
| ENST00000683862.1 | hg38 | chr1 | 153,297,116 | 153,312,952 | 15,837 |
| ENST00000683862.1 | hg19 | chr1 | 153,269,592 | 153,285,428 | 15,837 |
| ENST00000290722.1 | hg19 | chr1 | 153,270,338 | 153,283,194 | 12,857 |
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