PGLYRP2 peptidoglycan recognition protein 2
Information
- Symbol
- PGLYRP2
- Type
- protein-coding
- Description
- peptidoglycan recognition protein 2
- Entrez Gene ID
- 114770
- Genome
- hg19
- Position
- chr19:15,579,456-15,590,312
- Genome
- hg38
- Position
- chr19:15,468,645-15,479,501
- MIM
- 608199 OMIM
- HGNC
- HGNC:30013 HGNC
- Ensembl
- ENSG00000161031 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 2 |
| Likely benign | 0 | 4 |
| Uncertain significance | 0 | 42 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
48 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | HMFT0141 |
| SYNONYM | PGLYRPL |
| SYNONYM | PGRP-L |
| SYNONYM | PGRPL |
| SYNONYM | TAGL-like |
| SYNONYM | tagL |
| SYNONYM | tagL-alpha |
| SYNONYM | tagl-beta |
| MIM | 608199 OMIM |
| HGNC | HGNC:30013 HGNC |
| Ensembl | ENSG00000161031 Ensembl |
| AllianceGenome | HGNC:30013 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000292609.8 | hg38 | chr19 | 15,468,645 | 15,479,501 | 10,857 |
| ENST00000340880.5 | hg38 | chr19 | 15,468,645 | 15,479,501 | 10,857 |
| ENST00000292609.8 | hg19 | chr19 | 15,579,456 | 15,590,312 | 10,857 |
| ENST00000340880.5 | hg19 | chr19 | 15,579,456 | 15,590,312 | 10,857 |
Genome browser