GABARAPL2 GABA type A receptor associated protein like 2
Information
- Symbol
- GABARAPL2
- Type
- protein-coding
- Description
- GABA type A receptor associated protein like 2
- Entrez Gene ID
- 11345
- Genome
- hg19
- Position
- chr16:75,600,277-75,611,779
- Genome
- hg38
- Position
- chr16:75,566,379-75,577,881
- MIM
- 607452 OMIM
- HGNC
- HGNC:13291 HGNC
- Ensembl
- ENSG00000034713 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Uncertain significance | 0 | 2 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
2 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | ATG8 |
| SYNONYM | ATG8C |
| SYNONYM | GATE-16 |
| SYNONYM | GATE16 |
| SYNONYM | GEF-2 |
| SYNONYM | GEF2 |
| MIM | 607452 OMIM |
| HGNC | HGNC:13291 HGNC |
| Ensembl | ENSG00000034713 Ensembl |
| AllianceGenome | HGNC:13291 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000568455.1 | hg38 | chr16 | 75,566,598 | 75,577,530 | 10,933 |
| ENST00000565057.5 | hg38 | chr16 | 75,566,375 | 75,568,405 | 2,031 |
| ENST00000037243.7 | hg38 | chr16 | 75,566,379 | 75,577,881 | 11,503 |
| ENST00000563744.1 | hg38 | chr16 | 75,566,389 | 75,577,881 | 11,493 |
| ENST00000565057.5 | hg19 | chr16 | 75,600,273 | 75,602,303 | 2,031 |
| ENST00000037243.7 | hg19 | chr16 | 75,600,277 | 75,611,779 | 11,503 |
| ENST00000563744.1 | hg19 | chr16 | 75,600,287 | 75,611,779 | 11,493 |
| ENST00000568455.1 | hg19 | chr16 | 75,600,496 | 75,611,428 | 10,933 |
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