AFG3L2 AFG3 like matrix AAA peptidase subunit 2
Information
- Symbol
- AFG3L2
- Type
- protein-coding
- Description
- AFG3 like matrix AAA peptidase subunit 2
- Entrez Gene ID
- 10939
- Genome
- hg19
- Position
- chr18:12,328,943-12,377,226
- Genome
- hg38
- Position
- chr18:12,328,944-12,377,227
- MIM
- 604581 OMIM
- HGNC
- HGNC:315 HGNC
- Ensembl
- ENSG00000141385 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
MGeND | ClinVar | |
---|---|---|
Pathogenic | 0 | 62 |
Likely pathogenic | 0 | 50 |
Benign | 10 | 118 |
Likely benign | 0 | 254 |
Conflicting classifications of pathogenicity | 0 | 38 |
no classification for the single variant | 0 | 2 |
not provided | 0 | 8 |
Uncertain significance | 0 | 358 |
Ranking
ClinVar | |
---|---|
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0 |
![]() |
0 |
![]() |
186 |
![]() |
594 |
![]() |
36 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Type | ID |
---|---|
SYNONYM | OPA12 |
SYNONYM | SCA28 |
SYNONYM | SPAX5 |
MIM | 604581 OMIM |
HGNC | HGNC:315 HGNC |
Ensembl | ENSG00000141385 Ensembl |
AllianceGenome | HGNC:315 |
Descrption | Source | Links |
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ID | Genome | Chromosome | Start | End | Length |
---|---|---|---|---|---|
ENST00000691179.1 | hg38 | chr18 | 12,328,957 | 12,377,109 | 48,153 |
ENST00000688199.1 | hg38 | chr18 | 12,328,960 | 12,377,109 | 48,150 |
ENST00000269143.8 | hg38 | chr18 | 12,328,944 | 12,377,227 | 48,284 |
ENST00000269143.8 | hg19 | chr18 | 12,328,943 | 12,377,226 | 48,284 |
ENST00000691179.1 | hg19 | chr18 | 12,328,956 | 12,377,108 | 48,153 |
ENST00000688199.1 | hg19 | chr18 | 12,328,959 | 12,377,108 | 48,150 |
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