CGA glycoprotein hormones, alpha polypeptide

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
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Variants
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Information

Symbol: CGA
Type: protein-coding
Description: glycoprotein hormones, alpha polypeptide
Entrez Gene ID: 1081
Genome: hg19
Position: chr6:87,795,402-87,804,822
Genome: hg38
Position: chr6:87,085,684-87,095,104
MIM: 118850 OMIM
HGNC: HGNC:1885 HGNC
Ensembl: ENSG00000135346 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Benign	0	4
Likely benign	0	2

Ranking

	ClinVar
	0
	0
	0
	6
	0

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

[No Data.]

Locus Zoom

Variants

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Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
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Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	CG-ALPHA
SYNONYM	FSHA
SYNONYM	GPA1
SYNONYM	GPHA1
SYNONYM	GPHa
SYNONYM	HCG
SYNONYM	LHA
SYNONYM	TSHA
MIM	118850 OMIM
HGNC	HGNC:1885 HGNC
Ensembl	ENSG00000135346 Ensembl
AllianceGenome	HGNC:1885

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000610310.3	hg38	chr6	87,085,684	87,095,104	9,421
ENST00000627148.3	hg38	chr6	87,085,498	87,095,106	9,609
ENST00000369582.6	hg38	chr6	87,085,503	87,095,059	9,557
ENST00000630630.2	hg38	chr6	87,085,790	87,095,104	9,315
ENST00000627148.3	hg19	chr6	87,795,216	87,804,824	9,609
ENST00000369582.6	hg19	chr6	87,795,221	87,804,777	9,557
ENST00000610310.3	hg19	chr6	87,795,402	87,804,822	9,421
ENST00000630630.2	hg19	chr6	87,795,508	87,804,822	9,315

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