TXNIP thioredoxin interacting protein

Go to:

Information
Clinical Significance
Ranking
Frequency
Disease area statistics
Locus Zoom
Variants
Genome browser

Information

Symbol: TXNIP
Type: protein-coding
Description: thioredoxin interacting protein
Entrez Gene ID: 10628
Genome: hg19
Position: chr1:145,438,490-145,442,635
Genome: hg38
Position: chr1:145,992,435-145,996,579
MIM: 606599 OMIM
HGNC: HGNC:16952 HGNC
Ensembl: ENSG00000265972 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Benign	0	8
not provided	4	0
Uncertain significance	0	42

Ranking

	ClinVar
	0
	0
	0
	50
	0

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

Locus Zoom

Variants

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	ARRDC6
SYNONYM	EST01027
SYNONYM	HHCPA78
SYNONYM	THIF
SYNONYM	VDUP1
MIM	606599 OMIM
HGNC	HGNC:16952 HGNC
Ensembl	ENSG00000265972 Ensembl
AllianceGenome	HGNC:16952

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000425134.2	hg38	chr1	145,993,839	145,995,763	1,925
ENST00000582401.6	hg38	chr1	145,992,435	145,996,579	4,145
ENST00000582401.6	hg19	chr1	145,438,490	145,442,635	4,146
ENST00000425134.2	hg19	chr1	145,439,306	145,441,230	1,925

Key	Value
strand	+
UniProt	TSG
start	145,438,437
Gene Symbol	TXNIP
Entrez GeneId	10,628
Chr Band	1q21.1
end	145,442,643
chr	chr1

Genome browser