HTATIP2 HIV-1 Tat interactive protein 2

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
Locus Zoom
Variants
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Information

Symbol: HTATIP2
Type: protein-coding
Description: HIV-1 Tat interactive protein 2
Entrez Gene ID: 10553
Genome: hg19
Position: chr11:20,385,289-20,405,328
Genome: hg38
Position: chr11:20,363,743-20,383,782
MIM: 605628 OMIM
HGNC: HGNC:16637 HGNC
Ensembl: ENSG00000109854 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Likely benign	0	2
Uncertain significance	0	22

Ranking

	ClinVar
	0
	0
	0
	24
	0

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

[No Data.]

Locus Zoom

Variants

Search Word

Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
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Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	CC3
SYNONYM	SDR44U1
SYNONYM	TIP30
MIM	605628 OMIM
HGNC	HGNC:16637 HGNC
Ensembl	ENSG00000109854 Ensembl
AllianceGenome	HGNC:16637

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000531058.1	hg38	chr11	20,364,180	20,383,616	19,437
ENST00000532505.1	hg38	chr11	20,363,854	20,367,513	3,660
ENST00000451739.7	hg38	chr11	20,363,714	20,383,782	20,069
ENST00000419348.6	hg38	chr11	20,363,743	20,383,782	20,040
ENST00000532081.1	hg38	chr11	20,364,141	20,367,655	3,515
ENST00000421577.6	hg38	chr11	20,363,723	20,383,334	19,612
ENST00000443524.6	hg38	chr11	20,363,725	20,383,368	19,644
ENST00000530266.5	hg38	chr11	20,363,685	20,367,625	3,941
ENST00000530266.5	hg19	chr11	20,385,231	20,389,171	3,941
ENST00000451739.7	hg19	chr11	20,385,260	20,405,328	20,069
ENST00000421577.6	hg19	chr11	20,385,269	20,404,880	19,612
ENST00000443524.6	hg19	chr11	20,385,271	20,404,914	19,644
ENST00000419348.6	hg19	chr11	20,385,289	20,405,328	20,040
ENST00000532505.1	hg19	chr11	20,385,400	20,389,059	3,660
ENST00000532081.1	hg19	chr11	20,385,687	20,389,201	3,515
ENST00000531058.1	hg19	chr11	20,385,726	20,405,162	19,437

Key	Value
strand	+
UniProt	TSG
start	20,385,230
Gene Symbol	HTATIP2
Entrez GeneId	10,553
Chr Band	11p15.1
end	20,405,328
chr	chr11

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