GACAT1 gastric cancer associated transcript 1

Information
Symbol
GACAT1
Type
ncRNA
Description
gastric cancer associated transcript 1
Entrez Gene ID
104326057
Genome
hg19
Position
chr2:108,370,601-108,428,804
Genome
hg38
Position
chr2:107,754,145-107,812,348
HGNC
HGNC:48336 HGNC
Ensembl
ENSG00000232991 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
not provided 2 0
Ranking
ClinVar
0
0
0
0
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM LINC00876
HGNC HGNC:48336 HGNC
Ensembl ENSG00000232991 Ensembl
AllianceGenome HGNC:48336
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000441383.5 hg38 chr2 107,754,112 107,822,129 68,018
ENST00000419650.1 hg38 chr2 107,754,145 107,812,348 58,204
ENST00000441383.5 hg19 chr2 108,370,568 108,438,585 68,018
ENST00000419650.1 hg19 chr2 108,370,601 108,428,804 58,204
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