SCAT1 S-phase cancer associated transcript 1
Information
- Symbol
- SCAT1
- Type
- ncRNA
- Description
- S-phase cancer associated transcript 1
- Entrez Gene ID
- 101928710
- Genome
- hg19
- Position
- chr17:76,613,475-76,628,133
- Genome
- hg38
- Position
- chr17:78,617,393-78,632,051
- HGNC
- HGNC:52930 HGNC
- Ensembl
- ENSG00000267123 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
MGeND | ClinVar |
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Ranking
ClinVar | |
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0 |
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Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data | : |
MGeND data only
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Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
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Target data | : |
MGeND data only
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Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Type | ID |
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SYNONYM | LINC02081 |
SYNONYM | XLOC_012582 |
HGNC | HGNC:52930 HGNC |
Ensembl | ENSG00000267123 Ensembl |
AllianceGenome | HGNC:52930 |
Descrption | Source | Links |
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ID | Genome | Chromosome | Start | End | Length |
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ENST00000648757.1 | hg38 | chr17 | 78,607,928 | 78,632,104 | 24,177 |
ENST00000650316.2 | hg38 | chr17 | 78,617,388 | 78,632,048 | 14,661 |
ENST00000586185.2 | hg38 | chr17 | 78,617,393 | 78,632,051 | 14,659 |
ENST00000650475.1 | hg38 | chr17 | 78,617,599 | 78,630,403 | 12,805 |
ENST00000648404.1 | hg38 | chr17 | 78,617,426 | 78,632,048 | 14,623 |
ENST00000647957.1 | hg38 | chr17 | 78,617,397 | 78,632,067 | 14,671 |
ENST00000650625.1 | hg38 | chr17 | 78,617,393 | 78,632,050 | 14,658 |
ENST00000648757.1 | hg19 | chr17 | 76,604,010 | 76,628,186 | 24,177 |
ENST00000648404.1 | hg19 | chr17 | 76,613,508 | 76,628,130 | 14,623 |
ENST00000647957.1 | hg19 | chr17 | 76,613,479 | 76,628,149 | 14,671 |
ENST00000586185.2 | hg19 | chr17 | 76,613,475 | 76,628,133 | 14,659 |
ENST00000650316.2 | hg19 | chr17 | 76,613,470 | 76,628,130 | 14,661 |
ENST00000650475.1 | hg19 | chr17 | 76,613,681 | 76,626,485 | 12,805 |
ENST00000650625.1 | hg19 | chr17 | 76,613,475 | 76,628,132 | 14,658 |
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