SCAT1 S-phase cancer associated transcript 1

Information
Symbol
SCAT1
Type
ncRNA
Description
S-phase cancer associated transcript 1
Entrez Gene ID
101928710
Genome
hg19
Position
chr17:76,613,475-76,628,133
Genome
hg38
Position
chr17:78,617,393-78,632,051
HGNC
HGNC:52930 HGNC
Ensembl
ENSG00000267123 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Ranking
ClinVar
0
0
0
0
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM LINC02081
SYNONYM XLOC_012582
HGNC HGNC:52930 HGNC
Ensembl ENSG00000267123 Ensembl
AllianceGenome HGNC:52930
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000648757.1 hg38 chr17 78,607,928 78,632,104 24,177
ENST00000650316.2 hg38 chr17 78,617,388 78,632,048 14,661
ENST00000586185.2 hg38 chr17 78,617,393 78,632,051 14,659
ENST00000650475.1 hg38 chr17 78,617,599 78,630,403 12,805
ENST00000648404.1 hg38 chr17 78,617,426 78,632,048 14,623
ENST00000647957.1 hg38 chr17 78,617,397 78,632,067 14,671
ENST00000650625.1 hg38 chr17 78,617,393 78,632,050 14,658
ENST00000648757.1 hg19 chr17 76,604,010 76,628,186 24,177
ENST00000648404.1 hg19 chr17 76,613,508 76,628,130 14,623
ENST00000647957.1 hg19 chr17 76,613,479 76,628,149 14,671
ENST00000586185.2 hg19 chr17 76,613,475 76,628,133 14,659
ENST00000650316.2 hg19 chr17 76,613,470 76,628,130 14,661
ENST00000650475.1 hg19 chr17 76,613,681 76,626,485 12,805
ENST00000650625.1 hg19 chr17 76,613,475 76,628,132 14,658
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