ARLNC1 androgen receptor regulated long noncoding RNA 1
Information
- Symbol
- ARLNC1
- Type
- ncRNA
- Description
- androgen receptor regulated long noncoding RNA 1
- Entrez Gene ID
- 100996425
- Genome
- hg19
- Position
- chr16:80,859,971-80,879,620
- Genome
- hg38
- Position
- chr16:80,826,074-80,845,723
- MIM
- 618053 OMIM
- HGNC
- HGNC:53032 HGNC
- Ensembl
- ENSG00000260896 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar |
|---|
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
0 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | LINC02170 |
| SYNONYM | PRCAT47 |
| MIM | 618053 OMIM |
| HGNC | HGNC:53032 HGNC |
| Ensembl | ENSG00000260896 Ensembl |
| AllianceGenome | HGNC:53032 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000652422.1 | hg38 | chr16 | 80,826,074 | 80,845,723 | 19,650 |
| ENST00000651118.1 | hg38 | chr16 | 80,829,786 | 80,844,375 | 14,590 |
| ENST00000651521.1 | hg38 | chr16 | 80,830,494 | 80,875,085 | 44,592 |
| ENST00000651730.1 | hg38 | chr16 | 80,829,793 | 80,846,503 | 16,711 |
| ENST00000652512.1 | hg38 | chr16 | 80,829,787 | 80,847,828 | 18,042 |
| ENST00000651118.1 | hg19 | chr16 | 80,863,683 | 80,878,272 | 14,590 |
| ENST00000652422.1 | hg19 | chr16 | 80,859,971 | 80,879,620 | 19,650 |
| ENST00000651730.1 | hg19 | chr16 | 80,863,690 | 80,880,400 | 16,711 |
| ENST00000651521.1 | hg19 | chr16 | 80,864,391 | 80,908,982 | 44,592 |
| ENST00000652512.1 | hg19 | chr16 | 80,863,684 | 80,881,725 | 18,042 |
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