SCAMP3 secretory carrier membrane protein 3
Information
- Symbol
- SCAMP3
- Type
- protein-coding
- Description
- secretory carrier membrane protein 3
- Entrez Gene ID
- 10067
- Genome
- hg19
- Position
- chr1:155,225,772-155,232,151
- Genome
- hg38
- Position
- chr1:155,255,981-155,262,360
- MIM
- 606913 OMIM
- HGNC
- HGNC:10565 HGNC
- Ensembl
- ENSG00000116521 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely benign | 0 | 2 |
| Uncertain significance | 0 | 52 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
54 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C1orf3 |
| MIM | 606913 OMIM |
| HGNC | HGNC:10565 HGNC |
| Ensembl | ENSG00000116521 Ensembl |
| AllianceGenome | HGNC:10565 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000472397.6 | hg38 | chr1 | 155,256,007 | 155,262,360 | 6,354 |
| ENST00000355379.3 | hg38 | chr1 | 155,255,981 | 155,262,430 | 6,450 |
| ENST00000714216.1 | hg38 | chr1 | 155,255,982 | 155,262,266 | 6,285 |
| ENST00000714213.1 | hg38 | chr1 | 155,255,980 | 155,261,910 | 5,931 |
| ENST00000714214.1 | hg38 | chr1 | 155,255,980 | 155,262,266 | 6,287 |
| ENST00000714219.1 | hg38 | chr1 | 155,255,982 | 155,262,360 | 6,379 |
| ENST00000714217.1 | hg38 | chr1 | 155,255,982 | 155,262,266 | 6,285 |
| ENST00000714218.1 | hg38 | chr1 | 155,255,982 | 155,262,268 | 6,287 |
| ENST00000302631.8 | hg38 | chr1 | 155,255,981 | 155,262,360 | 6,380 |
| ENST00000478737.6 | hg38 | chr1 | 155,255,979 | 155,262,314 | 6,336 |
| ENST00000714220.1 | hg38 | chr1 | 155,255,987 | 155,262,266 | 6,280 |
| ENST00000478737.6 | hg19 | chr1 | 155,225,770 | 155,232,105 | 6,336 |
| ENST00000714213.1 | hg19 | chr1 | 155,225,771 | 155,231,701 | 5,931 |
| ENST00000302631.8 | hg19 | chr1 | 155,225,772 | 155,232,151 | 6,380 |
| ENST00000355379.3 | hg19 | chr1 | 155,225,772 | 155,232,221 | 6,450 |
| ENST00000472397.6 | hg19 | chr1 | 155,225,798 | 155,232,151 | 6,354 |
| ENST00000714214.1 | hg19 | chr1 | 155,225,771 | 155,232,057 | 6,287 |
| ENST00000714216.1 | hg19 | chr1 | 155,225,773 | 155,232,057 | 6,285 |
| ENST00000714217.1 | hg19 | chr1 | 155,225,773 | 155,232,057 | 6,285 |
| ENST00000714218.1 | hg19 | chr1 | 155,225,773 | 155,232,059 | 6,287 |
| ENST00000714219.1 | hg19 | chr1 | 155,225,773 | 155,232,151 | 6,379 |
| ENST00000714220.1 | hg19 | chr1 | 155,225,778 | 155,232,057 | 6,280 |
Genome browser