POC1B-GALNT4 POC1B-GALNT4 readthrough
Information
- Symbol
- POC1B-GALNT4
- Type
- protein-coding
- Description
- POC1B-GALNT4 readthrough
- Entrez Gene ID
- 100528030
- Genome
- hg19
- Position
- chr12:89,913,185-89,919,975
- Genome
- hg38
- Position
- chr12:89,519,408-89,526,198
- HGNC
- HGNC:42957 HGNC
- Ensembl
- ENSG00000259075 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
MGeND | ClinVar | |
---|---|---|
Pathogenic | 0 | 2 |
Likely pathogenic | 0 | 6 |
Benign | 0 | 8 |
Likely benign | 0 | 38 |
Uncertain significance | 0 | 110 |
Ranking
ClinVar | |
---|---|
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0 |
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0 |
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2 |
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160 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data | : |
MGeND data only
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Category | : |
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Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Type | ID |
---|---|
SYNONYM | GALNT4 |
SYNONYM | GalNAc-T4 |
HGNC | HGNC:42957 HGNC |
Ensembl | ENSG00000259075 Ensembl |
AllianceGenome | HGNC:42957 |
Descrption | Source | Links |
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ID | Genome | Chromosome | Start | End | Length |
---|---|---|---|---|---|
ENST00000547474.1 | hg38 | chr12 | 89,521,934 | 89,526,262 | 4,329 |
ENST00000548729.5 | hg38 | chr12 | 89,519,408 | 89,526,198 | 6,791 |
ENST00000548729.5 | hg19 | chr12 | 89,913,185 | 89,919,975 | 6,791 |
ENST00000547474.1 | hg19 | chr12 | 89,915,711 | 89,920,039 | 4,329 |
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